Field | | Explanation or Example |
| |
|
cdd | | Conserved domains |
| |
|
| | nickel ABC transporter, nickel/metallophore periplasmic binding protein |
| |
|
cds | | Coding Sequences |
| |
|
| | gene name like rhlA product name like Mg transporter start position end position strand direction |
| |
|
fragment | | Chromosome information |
| |
|
| | RefSeq accession number like NC_000913 strain information like Newman bacteria; elusimicrobia; environmental samples Staphylococcus aureus subsp. aureus str. Newman |
| |
|
gap3 | | Sequence information for 3 prime-UTR |
| |
|
| | start position of 3 prime-UTR end position of 3 prime-UTR strand direction of 3 prime-UTR sequence of 3 prime-UTR in the same strand as the gene |
| |
|
gap5 | | Sequence information for 5 prime-UTR |
| |
|
| | start position of 5 prime-UTR end position of 5 prime-UTR strand direction of 5 prime-UTR sequence of 5 prime-UTR in the same strand as the gene |
| |
|
operon | | Operon |
| |
|
| | ex:PA3479 glutamine synthetase, type I-->nitrogen regulatory protein P-II |
| |
|
organism | | Organism |
| |
|
| | +/- spiral/rod/coccus etc singles/pairs/chains no/yes no/yes Non-halophilic/halophilic/Moderate halophilic anaerobic/aerobic/facultative/microaerophilic aquatic/multiple/host-associated mesophilic/psychrophilic/thermophilic/hyperthermophilic 30-42/25-30/25-40 human/animal/plant/insect Q fever |
| |
|
rna_family | | Family of RNA according to Rfam |
| |
|
| | cis-reg; riboswitch; |
| |
|
rna_known | | Known RNA according to Rfam |
| |
|
| | start position of RNA end position of RNA strand of RNA |